详见个人主页，近五年部分论文信息如下：（以下论文中，+为共同第一作者， *为通讯作者）
1. Huiyan Sun+, Yi Zhou+, Michael Francis Skaro, Yiran Wu, Zexing Qu, Fenglou Mao, Suwen Zhao, Ying Xu*. (2020). Metabolic Reprogramming in Cancer is Induced to Increase Proton Production. Cancer Research, DOI: 10.1158/0008-5472.CAN-19-3392. (中科院一区, Nature Index 期刊)
2. Yi Zhou+, Huiyan Sun+, Ying Xu*. (2020). Metabolic reprogramming in cancer: The bridge that connects intracellular stresses and cancer behaviors. National Science Review 7(8):1270-1273. (中科院一区)
3. Sun Huiyan, Chen Liang, Cao Sha, Liang Yanchun, Xu Ying*. (2019). Warburg Effects in Cancer and Normal Proliferating Cells: Two Tales of the Same Name. Genomics, Proteomics & Bioinformatics,17(3). (中科院一区)
4. Sun Huiyan , Zhang Chi, Cao Sha, Sheng Tao, Dong Ning, Xu Ying*. (2018). Fenton reactions drive nucleotide and ATP syntheses in cancer, Journal of Molecular Cell Biology,10(5):448-459. (中科院二区)
5. Yijun Liu, Ji Sun, Huiyan Sun*, Yi Chang*.(2022) Identification of key somatic oncogenic mutation based on a confounder-free causal inference model. PLOS Computational Biology, doi:10.1371/journal.pcbi.1010529 (中科院二区）
6. Qiang Huang, Jundong Li, Huiyan Sun*, Yi Chang*. SemiITE: Semi-supervised Individual Treatment Effect Estimation via Disagreement-Based Co-training. ECML-PKDD 2022 (CCF-B会议)
7. Qiang Huang, Tingyu Xia, Huiyan Sun*, Makoto Yamada*, Yi Chang. Unsupervised Nonlinear Feature Selection from High-dimensional Signed Networks. AAAI 2020. (CCF-A会议)
8. Liang Chen+, Changliang Wang+, Huiyan Sun+, Juexin Wang, Yanchun Liang, Garry Wong*. (2020). The bioinformatics toolbox for circRNA discovery and analysis. Briefings in Bioinformatics, DOI: 10.1093/bib/bbaa001. (中科院一区)
9. Yijun Liu, Fuhu Song, Zhi Li, Liang Chen, Ying Xu, Huiyan Sun*, Yi Chang*.(2023). DBPOM: a comprehensive database of pharmaco-omics for cancer precision medicine. Frontiers in Pharmacology, 14, 32
10. Hongzhi Song, Chaoyi Yin, Z Li, Ke Feng, Yangkun Cao, Yujie Gu, Huiyan Sun*(2023). Identification of Cancer Driver Genes by Integrating Multi-omics Data with Graph Neural Networks. Metabolites 13 (3), 339
11. Huiyan Sun+, Yi Zhou+, Hongyang Jiang, Ying Xu*. (2020). Elucidation of Functional Roles of Sialic Acids in Cancer Migration. Frontiers in Oncology, DOI: 10.3389/fonc.2020.00401. (中科院二区)
12. Yingze Xu, Yan Wang*, Xuping Xie, Feilong Wang, Qi Chen, Huiyan Sun* (2021) An AutoEncoder-Based Matrix Factorization Approach to Estimating Cell Proportion from Bulk Tumor RNA-seq Data IEEE BIBM. (CCF-B会议)
13. Hongyang Jiang+, Zhihang Wang+, Chaoyi Yin, Peishuo Sun, Ying Xu*, Huiyan Sun*. (2020). Identification of Cancer Development Related Pathways Based on Co-Expression Analyses. IEEE BIBM 2020. (CCF-B会议)
14. Jiang Hongyang, Huang Qiang, Chen Liang, Li Zhi, Xu Ying, Sun Huiyan*, Chang Yi, Multi-classification of Cancer Samples based on Co-expression Analyses. IEEE BIBM 2019. (CCF-B会议)
15. Chaoyi Yin+, Yangkun Cao+, Peishuo Sun, Hengyuan Zhang, Zhi Li*, Ying Xu, Huiyan Sun* (2022) Molecular Subtyping of Cancer based on Robust Graph Neural Network and Multi-omics Data Integration. Frontiers in genetics, doi: 10.3389/fgene.2022.884028 (中科院三区)
16. Peishuo Sun, Ying Wu, Chaoyi Yin, Hongyang Jiang, Ying Xu, Huiyan Sun*. (2022) Molecular Subtyping of Cancer based on Distinguishing Co-expression Modules and Machine Learning. Frontiers in Genetics, doi: 10.3389/fgene.2022.866005(中科院三区)
17. Chen Liang, Sun Huiyan, Wang Changliang, Yang Yang, Zhang Menglei, Wong Garry*.(2018).miRNA Arm Switching Identifies Novel Tumour Biomarkers, Ebiomedicine, 38:37-46. (中科院一区)
18. Wang Xiaoyan, Jiang Bin, Sun Huiyan, Zheng Dejin, Zhang Zhenwu, Yan Li, Li Enqin, Xu Renhe*. (2018) CXCL12-dependent acetylation of wound healing by topical application of MSC spheres, but not single cells, derived from safety-enhanced Hesc. Theranostics 9(21):6112-6128. doi:10.7150/thno.32982. (中科院一区)
19. Chen Liang, Heikkinen Liisa, Wang Changliang, Yang Yang, Sun Huiyan, Wong Garry*. (2018). Trends in the development of miRNA bioinformatics tools, Briefings in Bioinformatics,20(5). (中科院一区, 高被引论文)
